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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928663.1_cds_XP_016476194.1_68054
CDS Infomation

[gene=LOC107797789] [db_xref=GeneID:107797789] [protein=pumilio homolog 23-like] [protein_id=XP_016476194.1] [location=complement(join(181565..181889,182341..182523,182612..182760,183050..183235,183559..183678,183979..184122,184785..184952,185186..185482,185821..186184,186327..186469))] [gbkey=CDS]
Sequence

ATGGGACGAAAGACGTCAAAAAAGCATACTGGATTTGATGCTGATAATACTATTGAAAGT
GTATCGGGAGGAAACACCTATGACAATGATAGAACTCGTAAGCCCAACCAGGCAACCCCT
GTTCCACAGACATCATTTCTCAGACAGCAGATTGATCCTGAGACTGCAAAATATTTTGCG
GAGATTGCTAATGCCATAGAAGGTACAGAAATTGACCCGGAGGAGCGGTCTGTCATTTGT
GGAAATGCATTGGAAGAAACAAGAGGGAAAGAAGTAGAACTTGCAACTGATTATATAATA
AGCCATACTTTGCAAACTCTACTTGAAGGTTGTTCTTTGGATCACCTTTGTAGTTTCCTT
CAGAGCTGTGCAAAGAATATCTCTCATATTGCAGCTGATAGATCAGGCTCTCACGTGGTC
GAAACGGCTTTAAAATCTCTATCTTATCACCTTCAGGAAAATGAGAACCATTCTCTGATT
GAACAAGCTTTGACTAAACTTTGTAAGGCAATTGTTGTGAATCCTGTCGATATAATGTGC
AACTGCCATGGATCTCATGTGCTTCGGAGTCTTCTTTGCCTACTTAAAGGGGTGCCTTTA
GAAGAGTTCCATTCCACAAAGTCATCAGTTGTCTTGGCTGAACGCTTGAATCTCAAGGCG
CCTCATGCAAAAGACAATGGCTCATTGCAGTCTCAGCAAATATTTCCTAATTTGCTTAAA
GATTTTGTATCAGAGATGTTAAATGTTGCCAGTGAAGACATTTCAAAACTTCAAACTAAT
CAATACAGCAGTTTAGTTCTGCAGACTGCTTTGAAATTATTTGCTGGAAATGAACAGGAA
TTGTTGCATTTAATTCGAGTTCTTCTTGGGAGCAGCGCTGAAAGTGCCAATGCTGGAAAC
TTGTTAGAAGGAAAAACCATACGAAACATTTCAAGGCTAGTGGAAGAAACTGCATACAGT
CATTTGATGGAGGTCATCCTGGAATTTGTTCCTGAAACATTGTACAGTGAGTTGTTAACA
AAAGTTTTCAGGAAGTCATTGTTTCGAATGTCATCTCATCACTGTGCGAACTTCGTTGTG
CAGGCTTTAGCATCTCACGCCAAAAGTGAGGATCATATGGACTTGATCTGGGAGGAGCTT
GGAACAAAGTTTCATGATCTTTTCGAAATGGGAAAGTCTGGAGTTGTTGCTTCTGTCCTT
GCTGCAACTCAAAGGCTCCACAGTCATGAACATGAGTGTTGTCAGGCCATTGCTTCCGCT
GTATGCACAGGGGATGAGTTTCCCAAGTGTATCATCCCCCGAATATTATTTCTTGAAAAT
TTCTTTTGCTCAGGTGACAAATCTAACTGGAGTTGGCCACACGGAACAAAGATCCATGTA
GTTGGATCTCTTATTCTGCAGTCAATATTTAGACTTCCCAGTGAACTCATACAGGTCTAT
ATTACTAGTATCACATCTTTGGAAGAGCATCATGTTCTTGAGGCATCGAAAGATCCTAGT
GGTTCGCGGGTCATTGAATCTTTCCTCAACTCGAATATATCGGCAAAGCAAAAGCGGAAG
TTAGTTGCCAAGCTTCGAGGACATTTTGGTGAGCTCTCAGTGCACCCATTTGGTTCATTT
ACAGTTGAAAAGTGCTTCACTGCTAGTAACTTGTCTCTGAGAGAAACAATAGTGTCGGAA
ATGTTACCTCTCCAATCAGAGCTATCCAAGACTAAGCAGGGGCCTTACCTACTGAGGAAA
TTCTATATTGACGGATTTGCAAGGCAACCTGATCAGTGGAAGTCGAGACAAGCTTCACAA
CAATCTGCGCTCAAAGAATTTTATGCTACATTCGGACCAAGGGAAACCAAATCACTTGTA
AAGGAGAACTTTCTTGCTGATACTCATTCCAAACCAAAGCAAGAAAAATTGAAAGACATT
AGGAAAGAGATCGAGCCGACTTTGTCTTCTGCCAAAACTTCCAATACCCCCTTTTTGGCT
CATCAGGTTTCCAAAAAAGTGAAAAGGTCGAAAGATGAGAAGAAAAGGCATAGGAAAGAT
GGTCAATCAGAATCTCAAAGAAAGAGGACTAAAGTTTAA

Peptide Sequence

PEP ID

XP_016476194.1
PEP Infomation

PREDICTED: pumilio homolog 23-like [Nicotiana tabacum]
Sequence

MGRKTSKKHTGFDADNTIESVSGGNTYDNDRTRKPNQATPVPQTSFLRQQIDPETAKYFA
EIANAIEGTEIDPEERSVICGNALEETRGKEVELATDYIISHTLQTLLEGCSLDHLCSFL
QSCAKNISHIAADRSGSHVVETALKSLSYHLQENENHSLIEQALTKLCKAIVVNPVDIMC
NCHGSHVLRSLLCLLKGVPLEEFHSTKSSVVLAERLNLKAPHAKDNGSLQSQQIFPNLLK
DFVSEMLNVASEDISKLQTNQYSSLVLQTALKLFAGNEQELLHLIRVLLGSSAESANAGN
LLEGKTIRNISRLVEETAYSHLMEVILEFVPETLYSELLTKVFRKSLFRMSSHHCANFVV
QALASHAKSEDHMDLIWEELGTKFHDLFEMGKSGVVASVLAATQRLHSHEHECCQAIASA
VCTGDEFPKCIIPRILFLENFFCSGDKSNWSWPHGTKIHVVGSLILQSIFRLPSELIQVY
ITSITSLEEHHVLEASKDPSGSRVIESFLNSNISAKQKRKLVAKLRGHFGELSVHPFGSF
TVEKCFTASNLSLRETIVSEMLPLQSELSKTKQGPYLLRKFYIDGFARQPDQWKSRQASQ
QSALKEFYATFGPRETKSLVKENFLADTHSKPKQEKLKDIRKEIEPTLSSAKTSNTPFLA
HQVSKKVKRSKDEKKRHRKDGQSESQRKRTKV

Transcript Sequence

Gene sequence data has not been registered.